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BlastHits Module

Types

Type Description

BlastHit

Functions and values

Function or value Description

getAlignmentLength bh

Full Usage: getAlignmentLength bh

Parameters:
Returns: int
bh : BlastHit
Returns: int

getBitScore bh

Full Usage: getBitScore bh

Parameters:
Returns: int
bh : BlastHit
Returns: int

getEValue bh

Full Usage: getEValue bh

Parameters:
Returns: int
bh : BlastHit
Returns: int

getIdentical bh

Full Usage: getIdentical bh

Parameters:
Returns: int
bh : BlastHit
Returns: int

getMismatches bh

Full Usage: getMismatches bh

Parameters:
Returns: int
bh : BlastHit
Returns: int

getPositives bh

Full Usage: getPositives bh

Parameters:
Returns: int
bh : BlastHit
Returns: int

getQueryId bh

Full Usage: getQueryId bh

Parameters:
Returns: string
bh : BlastHit
Returns: string

getQueryLength bh

Full Usage: getQueryLength bh

Parameters:
Returns: int
bh : BlastHit
Returns: int

getRank bh

Full Usage: getRank bh

Parameters:
Returns: int
bh : BlastHit
Returns: int

getSubjectId bh

Full Usage: getSubjectId bh

Parameters:
Returns: string
bh : BlastHit
Returns: string

getSubjectLength bh

Full Usage: getSubjectLength bh

Parameters:
Returns: int
bh : BlastHit
Returns: int

lengthSimilarity bh

Full Usage: lengthSimilarity bh

Parameters:
Returns: float
bh : BlastHit
Returns: float

subjectQuerySimilarity bh

Full Usage: subjectQuerySimilarity bh

Parameters:
Returns: float
bh : BlastHit
Returns: float

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