Header menu logo BioFSharp

BlastQueries Module

Types

Type Description

BlastQuery

Functions and values

Function or value Description

filterHits predicate bq

Full Usage: filterHits predicate bq

Parameters:
Returns: BlastQuery
predicate : BlastHit -> bool
bq : BlastQuery
Returns: BlastQuery

fromFile filePath

Full Usage: fromFile filePath

Parameters:
    filePath : string

Returns: BlastQuery seq

Reads BlastQuery from file.

filePath : string
Returns: BlastQuery seq

fromFileEnumerator fileEnumerator

Full Usage: fromFileEnumerator fileEnumerator

Parameters:
    fileEnumerator : string seq

Returns: BlastQuery seq

Reads BlastQuery from file enumerator

fileEnumerator : string seq
Returns: BlastQuery seq

getBlastHits bq

Full Usage: getBlastHits bq

Parameters:
Returns: BlastHit list
bq : BlastQuery
Returns: BlastHit list

getQueryId bq

Full Usage: getQueryId bq

Parameters:
Returns: string
bq : BlastQuery
Returns: string

mapHits mapping bq

Full Usage: mapHits mapping bq

Parameters:
Returns: BlastQuery
mapping : BlastHit -> BlastHit
bq : BlastQuery
Returns: BlastQuery

tryGetBestHit bq

Full Usage: tryGetBestHit bq

Parameters:
Returns: BlastHit option
bq : BlastQuery
Returns: BlastHit option

Type something to start searching.