Mgf (BioFSharp) | BioFSharp

Mgf Module

Namespace: BioFSharp.IO
Assembly: BioFSharp.IO.dll

Mgf `_ is a simple human-readable format for MS/MS data. It allows storing MS/MS peak lists and exprimental parameters.

Types

Type	Description
MgfEntry	Represents

Functions and values

Function or value	Description
`createMgfEntry parameters mass intensity` Full Usage: `createMgfEntry parameters mass intensity` Parameters: parameters : `Map<string, string>` mass : `float[]` intensity : `float[]` Returns: `MgfEntry`	parameters : `Map<string, string>` mass : `float[]` intensity : `float[]` Returns: `MgfEntry`
`mgfToString mgf` Full Usage: `mgfToString mgf` Parameters: mgf : `MgfEntry` Returns: `string seq`	Converts a MgfEntry to string. Use Seq.write to write to file. mgf : `MgfEntry` Returns: `string seq`
`readMgf path` Full Usage: `readMgf path` Parameters: path : `string` Returns: `MgfEntry list`	Reads an mgf file into a collection of MgfEntries path : `string` Returns: `MgfEntry list`
`tryGetPrecursorCharges mgf` Full Usage: `tryGetPrecursorCharges mgf` Parameters: mgf : `MgfEntry` Returns: `int list option`	Returns the precursor mass. Returns None if the information can't be optained mgf : `MgfEntry` Returns: `int list option`
`tryGetPrecursorMZ mgf` Full Usage: `tryGetPrecursorMZ mgf` Parameters: mgf : `MgfEntry` Returns: `float option`	Returns the precursor mz. Returns None if the information can't be optained mgf : `MgfEntry` Returns: `float option`
`tryGetPrecursorMass mgf` Full Usage: `tryGetPrecursorMass mgf` Parameters: mgf : `MgfEntry` Returns: `float option`	Returns the precursor mass. Returns None if the information can't be optained mgf : `MgfEntry` Returns: `float option`
`tryGetTitle mgf` Full Usage: `tryGetTitle mgf` Parameters: mgf : `MgfEntry` Returns: `string option`	Returns the title string of a 'mgf-entry'. Returns None if the information can't be optained mgf : `MgfEntry` Returns: `string option`
`tryParseCharge str` Full Usage: `tryParseCharge str` Parameters: str : `string` Returns: `int list option`	Returns the posible charge/charges in a list. Returns None if the information can't be optained str : `string` Returns: `int list option`
`tryParseTitle title` Full Usage: `tryParseTitle title` Parameters: title : `string` Returns: `(float * float) option`	Returns the retention time and precursor intensity from 'mgf-title' string. Returns None if title does not contain the information title : `string` Returns: `(float * float) option`