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Platform Module

Types

Type Description

GPL

Functions and values

Function or value Description

Platform.fromFile path

Full Usage: Platform.fromFile path

Parameters:
    path : string

Returns: GPL

Read GEO platform metadata and associated sample/series Metadata from a SOFT formatted platform file (GPLXXXXX_family.soft)

path : string
Returns: GPL

Platform.fromFileEnumerator fileEnumerator

Full Usage: Platform.fromFileEnumerator fileEnumerator

Parameters:
    fileEnumerator : string seq

Returns: GPL

Read GEO platform metadata and associated sample/series Metadata from a sequence of strings representing a SOFT formatted platform

fileEnumerator : string seq
Returns: GPL

Platform.getAssociatedSampleAccessions gpl

Full Usage: Platform.getAssociatedSampleAccessions gpl

Parameters:
Returns: string list

returns sample accessions associated with the input platform GPL representation

gpl : GPL
Returns: string list

Platform.getAssociatedSamples gpl

Full Usage: Platform.getAssociatedSamples gpl

Parameters:
Returns: SampleRecord list

returns sample metadata associated with the input platform GPL representation

gpl : GPL
Returns: SampleRecord list

Platform.getAssociatedSeries gpl

Full Usage: Platform.getAssociatedSeries gpl

Parameters:
Returns: SeriesRecord list

returns series metadata associated with the input platform GPL representation

gpl : GPL
Returns: SeriesRecord list

Platform.getAssociatedSeriesAccessions gpl

Full Usage: Platform.getAssociatedSeriesAccessions gpl

Parameters:
Returns: string list

returns series accessions associated with the input platform GPL representation

gpl : GPL
Returns: string list

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