Series (BioFSharp) | BioFSharp

Series Module

Namespace: BioFSharp.IO
Assembly: BioFSharp.IO.dll
Parent Module: SOFT

Types

Type	Description
GSE

Functions and values

Function or value	Description
`Series.fromFile path` Full Usage: `Series.fromFile path` Parameters: path : `string` Returns: `GSE`	Read GEO series metadata and associated sample/platform metadata from a SOFT formatted series file (GPLXXXXX_family.soft) path : `string` Returns: `GSE`
`Series.fromFileEnumerator fileEnumerator` Full Usage: `Series.fromFileEnumerator fileEnumerator` Parameters: fileEnumerator : `string seq` Returns: `GSE`	Read GEO series metadata and associated sample/platform metadata from a sequence of strings representing a SOFT formatted series fileEnumerator : `string seq` Returns: `GSE`
`Series.getAssociatedPlatformAccessions gse` Full Usage: `Series.getAssociatedPlatformAccessions gse` Parameters: gse : `GSE` Returns: `string list`	returns platform accessions associated with the input series GSE representation gse : `GSE` Returns: `string list`
`Series.getAssociatedPlatforms gse` Full Usage: `Series.getAssociatedPlatforms gse` Parameters: gse : `GSE` Returns: `PlatformRecord list`	returns platform metadata associated with the input series GSE representation gse : `GSE` Returns: `PlatformRecord list`
`Series.getAssociatedSampleAccessions gse` Full Usage: `Series.getAssociatedSampleAccessions gse` Parameters: gse : `GSE` Returns: `string list`	returns sample accessions associated with the input series GSE representation gse : `GSE` Returns: `string list`
`Series.getAssociatedSamples gse` Full Usage: `Series.getAssociatedSamples gse` Parameters: gse : `GSE` Returns: `SampleRecord list`	returns sample metadata associated with the input series GSE representation gse : `GSE` Returns: `SampleRecord list`