NeedlemanWunsch (BioFSharp) | BioFSharp

NeedlemanWunsch Type

Namespace: BioFSharp.Algorithm
Assembly: BioFSharp.dll
Parent Module: Global
Base Type: obj

Constructors

Constructor	Description
`NeedlemanWunsch()` Full Usage: `NeedlemanWunsch()` Returns: `NeedlemanWunsch`	Returns: `NeedlemanWunsch`

Static members

Static member	Description
`NeedlemanWunsch.align (fstSeq, sndSeq, costs)` Full Usage: `NeedlemanWunsch.align (fstSeq, sndSeq, costs)` Parameters: fstSeq : `BioArray<Nucleotide>` sndSeq : `BioArray<Nucleotide>` costs : `Costs<Nucleotide>` Returns: `Alignment<Nucleotide list, GlobalAlignmentInfo>`	Returns the optimal global alignment of two Nucleotide BioArrays fstSeq : `BioArray<Nucleotide>` sndSeq : `BioArray<Nucleotide>` costs : `Costs<Nucleotide>` Returns: `Alignment<Nucleotide list, GlobalAlignmentInfo>`
`NeedlemanWunsch.align (fstSeq, sndSeq, costs)` Full Usage: `NeedlemanWunsch.align (fstSeq, sndSeq, costs)` Parameters: fstSeq : `BioArray<AminoAcidSymbol>` sndSeq : `BioArray<AminoAcidSymbol>` costs : `Costs<AminoAcidSymbol>` Returns: `Alignment<AminoAcidSymbol list, GlobalAlignmentInfo>`	Returns the optimal global alignment of two AminoAcidSymbol BioArrays fstSeq : `BioArray<AminoAcidSymbol>` sndSeq : `BioArray<AminoAcidSymbol>` costs : `Costs<AminoAcidSymbol>` Returns: `Alignment<AminoAcidSymbol list, GlobalAlignmentInfo>`
`NeedlemanWunsch.align (fstSeq, sndSeq, costs)` Full Usage: `NeedlemanWunsch.align (fstSeq, sndSeq, costs)` Parameters: fstSeq : `BioArray<AminoAcid>` sndSeq : `BioArray<AminoAcid>` costs : `Costs<AminoAcid>` Returns: `Alignment<AminoAcid list, GlobalAlignmentInfo>`	Returns the optimal global alignment of two AminoAcid BioArrays fstSeq : `BioArray<AminoAcid>` sndSeq : `BioArray<AminoAcid>` costs : `Costs<AminoAcid>` Returns: `Alignment<AminoAcid list, GlobalAlignmentInfo>`
`NeedlemanWunsch.align (fstSeq, sndSeq, costs, gapValue)` Full Usage: `NeedlemanWunsch.align (fstSeq, sndSeq, costs, gapValue)` Parameters: fstSeq : `'A[]` sndSeq : `'A[]` costs : `Costs<'A>` gapValue : `'A` Returns: `Alignment<'A list, GlobalAlignmentInfo>`	Returns the optimal global alignment of two arrays of generic values fstSeq : `'A[]` sndSeq : `'A[]` costs : `Costs<'A>` gapValue : `'A` Returns: `Alignment<'A list, GlobalAlignmentInfo>`
`NeedlemanWunsch.alignOption (fstSeq, sndSeq, costs)` Full Usage: `NeedlemanWunsch.alignOption (fstSeq, sndSeq, costs)` Parameters: fstSeq : `'A[]` sndSeq : `'A[]` costs : `Costs<'A>` Returns: `Alignment<'A option list, GlobalAlignmentInfo>`	Returns the optimal global alignment of two arrays of generic values fstSeq : `'A[]` sndSeq : `'A[]` costs : `Costs<'A>` Returns: `Alignment<'A option list, GlobalAlignmentInfo>`