FastA (BioFSharp)

FastA Module

Namespace: BioFSharp
Assembly: BioFSharp.dll
Parent Module: BioID

Types

Type	Description
FastaHeader<'IdType>

Functions and values

Function or value	Description
`aliasesOf header` Full Usage: `aliasesOf header` Parameters: header : `FastaHeader<'a>` Returns: `string`	Returns Aliases of FastA header. None if none present. header : `FastaHeader<'a>` Returns: `string`
`createFastaHeader id description info` Full Usage: `createFastaHeader id description info` Parameters: id : `'a` description : `string` info : `Map<string, string>` Returns: `FastaHeader<'a>`	id : `'a` description : `string` info : `Map<string, string>` Returns: `FastaHeader<'a>`
`dataBaseVersionOf header` Full Usage: `dataBaseVersionOf header` Parameters: header : `FastaHeader<'a>` Returns: `string`	Returns DataBaseVersion of FastA header. None if none present. header : `FastaHeader<'a>` Returns: `string`
`displayIdOf header` Full Usage: `displayIdOf header` Parameters: header : `FastaHeader<'a>` Returns: `string`	Returns DisplayId of FastA header. None if none present. header : `FastaHeader<'a>` Returns: `string`
`fromString str` Full Usage: `fromString str` Parameters: str : `string` Returns: `FastaHeader<string>`	Returns FastAHeader Object from UniProt style FastAHeader string For Reference see: https://www.uniprot.org/help/fasta-headers str : `string` Returns: `FastaHeader<string>`
`geneNameOf header` Full Usage: `geneNameOf header` Parameters: header : `FastaHeader<'a>` Returns: `string`	Returns GeneName of FastA header. None if none present. header : `FastaHeader<'a>` Returns: `string`
`organismNameOf header` Full Usage: `organismNameOf header` Parameters: header : `FastaHeader<'a>` Returns: `string`	Returns OrganismName of FastA header. None if none present. header : `FastaHeader<'a>` Returns: `string`
`proteinExistenceOf header` Full Usage: `proteinExistenceOf header` Parameters: header : `FastaHeader<'a>` Returns: `string`	Returns ProteinExistence of FastA header. None if none present. header : `FastaHeader<'a>` Returns: `string`
`proteinNameOf header` Full Usage: `proteinNameOf header` Parameters: header : `FastaHeader<'a>` Returns: `string`	Returns ProteinName of FastA header. None if none present. header : `FastaHeader<'a>` Returns: `string`
`sequenceVersionOf header` Full Usage: `sequenceVersionOf header` Parameters: header : `FastaHeader<'a>` Returns: `string`	Returns SequenceVersion of FastA header. None if none present. header : `FastaHeader<'a>` Returns: `string`
`setAliases alias header` Full Usage: `setAliases alias header` Parameters: alias : `string` header : `FastaHeader<'a>` Returns: `FastaHeader<'a>`	Sets Aliases in FastA header. alias : `string` header : `FastaHeader<'a>` Returns: `FastaHeader<'a>`
`setDataBaseVersion dbv header` Full Usage: `setDataBaseVersion dbv header` Parameters: dbv : `string` header : `FastaHeader<'a>` Returns: `FastaHeader<'a>`	Sets DataBaseVersion in FastA header. dbv : `string` header : `FastaHeader<'a>` Returns: `FastaHeader<'a>`
`setDisplayId displayId header` Full Usage: `setDisplayId displayId header` Parameters: displayId : `string` header : `FastaHeader<'a>` Returns: `FastaHeader<'a>`	Sets DisplayId in FastA header. displayId : `string` header : `FastaHeader<'a>` Returns: `FastaHeader<'a>`
`setGeneName gn header` Full Usage: `setGeneName gn header` Parameters: gn : `string` header : `FastaHeader<'a>` Returns: `FastaHeader<'a>`	Sets GeneName in FastA header. gn : `string` header : `FastaHeader<'a>` Returns: `FastaHeader<'a>`
`setIdType idType header` Full Usage: `setIdType idType header` Parameters: idType : `string` header : `FastaHeader<'a>` Returns: `FastaHeader<'a>`	Sets Type of UniqueIdentifier in FastA header. idType : `string` header : `FastaHeader<'a>` Returns: `FastaHeader<'a>`
`setOrganismName os header` Full Usage: `setOrganismName os header` Parameters: os : `string` header : `FastaHeader<'a>` Returns: `FastaHeader<'a>`	Sets OrganismName in FastA header. os : `string` header : `FastaHeader<'a>` Returns: `FastaHeader<'a>`
`setProteinExistence pe header` Full Usage: `setProteinExistence pe header` Parameters: pe : `string` header : `FastaHeader<'a>` Returns: `FastaHeader<'a>`	Sets ProteinExistence in FastA header. pe : `string` header : `FastaHeader<'a>` Returns: `FastaHeader<'a>`
`setProteinName pn header` Full Usage: `setProteinName pn header` Parameters: pn : `string` header : `FastaHeader<'a>` Returns: `FastaHeader<'a>`	Sets ProteinName in FastA header. pn : `string` header : `FastaHeader<'a>` Returns: `FastaHeader<'a>`
`setSequenceVersion sv header` Full Usage: `setSequenceVersion sv header` Parameters: sv : `string` header : `FastaHeader<'a>` Returns: `FastaHeader<'a>`	Sets SequenceVersion in FastA header. sv : `string` header : `FastaHeader<'a>` Returns: `FastaHeader<'a>`
`touOf header` Full Usage: `touOf header` Parameters: header : `FastaHeader<'a>` Returns: `string`	Returns Type of UniqueIdentifier of FastA header. None if none present. header : `FastaHeader<'a>` Returns: `string`