Basic structure and functionality for sequence alignments. Alignment functions can be found in the BioFSharp.Algorithm namespace.

Contains the AminoAcid type and its according functions. The AminoAcid type is a complex presentation of amino acids, allowing modifications

Contains the AminoAcidSymbol type and its according functions. The AminoAcidSymbol type is a lightweight, efficient presentation of amino acids

Contains functionalities for obtaining included literary data on key amino acid properties

This module contains the BioArray type and its according functions. The BioArray type is an array of objects using the IBioItem interface

Parsing Library for common biological ID formats like Cre(C.reinhardtii) or YeastId

Basic functions on IBioItems interface

Contains Functionalities for parsing Bioitems

This module contains the BioList type and its according functions. The BioList type is a List of objects using the IBioItem interface

This module contains the BioSeq type and its according functions. The BioSeq type is a sequence of objects using the IBioItem interface

Contains types and functions needed to digest amino acid sequences with proteases

Contains chemical elements represented as a mixture of their stable isotopes and functionality for building them

Contains functionality for working with molecules as a formula of their elements and formulas of biologically relevant molecules

Marker interface for BioItem base.

Finding the isoelectric point of peptides

Contains functionality for working with and creating isotopes and list of biologically relevant isotopes

Contains functionality for working with isotopic abundancies of molecules

Molecular mass related functions

Functionality for creating formula modifications

Lexer Tags for parsing BioItems

Contains the Nucleotide type and its according functions.

Contains functions to classify peptides based on their specificity when mapped to proteins

Recursive representation of a phylogenetic tree

Collection of physical constants

Record of a sequence and its tag