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Parameters Module

Contains modifier parameter type for Clustal Omega wrapper

Types

Type Description

ClustalParams

Collection of parameters for specifying clustalo alignment

ClusteringCustom

Optional modifiers to specify clustering

FileFormat

Input file format

InputCustom

Optional modifiers for input

IterationCustom

Specify maximum number of iterations for given step

LimitsCustom

Will exit early, if exceeded

MiscallaneousCustom

Optional, miscallaneous modifiers

OutputCustom

Optional modifiers for input

SeqType

Types of sequences

Functions and values

Function or value Description

stringOfClustalParams c

Full Usage: stringOfClustalParams c

Parameters:
Returns: string

Create argument string for clustal parameter

c : ClustalParams
Returns: string

Type something to start searching.