FastAHeaderParser (BioFSharp)

FastAHeaderParser Module

Parse FastA to GFF3

Function or value	Description
`createGFF3OfFastA fastA` Full Usage: `createGFF3OfFastA fastA` Parameters: fastA : `FastaItem<'A> seq` Returns: `GFFLine<'a> seq`	Takes a sequence of FastA items and transforms them into a sequence of GFF3 RNA and gene items. FastA headers have to be UniProt style. For Reference see: https://www.uniprot.org/help/fasta-headers fastA : `FastaItem<'A> seq` Returns: `GFFLine<'a> seq`
`createGFF3OfFastAWithRegex pattern fastA` Full Usage: `createGFF3OfFastAWithRegex pattern fastA` Parameters: pattern : `string` fastA : `FastaItem<'A> seq` Returns: `GFFLine<'a> seq`	Takes a sequence of FastA items and a regex pattern and transforms them into a sequence of GFF3 RNA items with decoy gene loci. pattern : `string` fastA : `FastaItem<'A> seq` Returns: `GFFLine<'a> seq`