Atom (BioFSharp)

Atom Type

Namespace: BioFSharp.IO
Assembly: BioFSharp.IO.dll
Parent Module: PDB
Base Type: obj
All Interfaces: IEquatable<Atom> , IStructuralEquatable , IComparable<Atom> , IComparable , IStructuralComparable

atomic coordinate record containing the X,Y,Z orthogonal � coordinates for atoms in standard residues (amino acids and nucleic acids).

Record fields

Record Field	Description
`AlternateLocationIndicator` Full Usage: `AlternateLocationIndicator` Field type: `string`	Field type: `string`
`ChainIdentifier` Full Usage: `ChainIdentifier` Field type: `string`	Field type: `string`
`Charge` Full Usage: `Charge` Field type: `string`	Field type: `string`
`ElementSymbol` Full Usage: `ElementSymbol` Field type: `string`	Field type: `string`
`Name` Full Usage: `Name` Field type: `AtomName`	Field type: `AtomName`
`Occupancy` Full Usage: `Occupancy` Field type: `float`	Field type: `float`
`ResidueInsertionCode` Full Usage: `ResidueInsertionCode` Field type: `string`	Field type: `string`
`ResidueName` Full Usage: `ResidueName` Field type: `string`	Field type: `string`
`ResidueSequenceNumber` Full Usage: `ResidueSequenceNumber` Field type: `int`	Field type: `int`
`SegmentIdentifier` Full Usage: `SegmentIdentifier` Field type: `string`	Field type: `string`
`SerialNumber` Full Usage: `SerialNumber` Field type: `int`	Field type: `int`
`TemperatureFactor` Full Usage: `TemperatureFactor` Field type: `float`	Field type: `float`
`X` Full Usage: `X` Field type: `float`	Field type: `float`
`Y` Full Usage: `Y` Field type: `float`	Field type: `float`
`Z` Full Usage: `Z` Field type: `float`	Field type: `float`

Static members

Static member Description

Static member	Description
`Atom.create (serialNumber, name, alternateLocationIndicator, residueName, chainIdentifier, residueSequenceNumber, residueInsertionCode, x, y, z, occupancy, temperatureFactor, segmentIdentifier, elementSymbol, charge)` Full Usage: `Atom.create (serialNumber, name, alternateLocationIndicator, residueName, chainIdentifier, residueSequenceNumber, residueInsertionCode, x, y, z, occupancy, temperatureFactor, segmentIdentifier, elementSymbol, charge)` Parameters: serialNumber : `int` name : `AtomName` alternateLocationIndicator : `string` residueName : `string` chainIdentifier : `string` residueSequenceNumber : `int` residueInsertionCode : `string` x : `float` y : `float` z : `float` occupancy : `float` temperatureFactor : `float` segmentIdentifier : `string` elementSymbol : `string` charge : `string` Returns: `Atom`	serialNumber : `int` name : `AtomName` alternateLocationIndicator : `string` residueName : `string` chainIdentifier : `string` residueSequenceNumber : `int` residueInsertionCode : `string` x : `float` y : `float` z : `float` occupancy : `float` temperatureFactor : `float` segmentIdentifier : `string` elementSymbol : `string` charge : `string` Returns: `Atom`
`Atom.toString atom` Full Usage: `Atom.toString atom` Parameters: atom : `Atom` Returns: `string`	atom : `Atom` Returns: `string`


                
                  
                    
                      Atom.create (serialNumber, name, alternateLocationIndicator, residueName, chainIdentifier, residueSequenceNumber, residueInsertionCode, x, y, z, occupancy, temperatureFactor, segmentIdentifier, elementSymbol, charge)

Full Usage:

Atom.create (serialNumber, name, alternateLocationIndicator, residueName, chainIdentifier, residueSequenceNumber, residueInsertionCode, x, y, z, occupancy, temperatureFactor, segmentIdentifier, elementSymbol, charge)

Parameters:

serialNumber : int

name : AtomName

alternateLocationIndicator : string

residueName : string

chainIdentifier : string

residueSequenceNumber : int

residueInsertionCode : string

x : float

y : float

z : float

occupancy : float

temperatureFactor : float

segmentIdentifier : string

elementSymbol : string

charge : string

Returns: Atom

serialNumber : int
name : AtomName
alternateLocationIndicator : string
residueName : string
chainIdentifier : string
residueSequenceNumber : int
residueInsertionCode : string
x : float
y : float
z : float
occupancy : float
temperatureFactor : float
segmentIdentifier : string
elementSymbol : string
charge : string

Returns: Atom


                
                  
                    
                      Atom.toString atom

Full Usage: Atom.toString atom

Parameters:

atom : Atom

Returns: string

atom : Atom

Returns: string