HetAtom (BioFSharp)

HetAtom Type

Namespace: BioFSharp.IO
Assembly: BioFSharp.IO.dll
Parent Module: PDB
Base Type: obj
All Interfaces: IEquatable<HetAtom> , IStructuralEquatable , IComparable<HetAtom> , IComparable , IStructuralComparable

atomic coordinate record containing the X,Y,Z orthogonal � coordinates for atoms in nonstandard residues. Nonstandard residues include inhibitors, cofactors, ions, and solvent. The only functional difference from ATOM records is that HETATM residues are by default not connected to other residues. Note that water residues should be in HETATM records.

Record fields

Record Field	Description
`AlternateLocationIndicator` Full Usage: `AlternateLocationIndicator` Field type: `string`	Field type: `string`
`ChainIdentifier` Full Usage: `ChainIdentifier` Field type: `string`	Field type: `string`
`Charge` Full Usage: `Charge` Field type: `string`	Field type: `string`
`ElementSymbol` Full Usage: `ElementSymbol` Field type: `string`	Field type: `string`
`Name` Full Usage: `Name` Field type: `AtomName`	Field type: `AtomName`
`Occupancy` Full Usage: `Occupancy` Field type: `float`	Field type: `float`
`ResidueInsertionCode` Full Usage: `ResidueInsertionCode` Field type: `string`	Field type: `string`
`ResidueName` Full Usage: `ResidueName` Field type: `string`	Field type: `string`
`ResidueSequenceNumber` Full Usage: `ResidueSequenceNumber` Field type: `int`	Field type: `int`
`SegmentIdentifier` Full Usage: `SegmentIdentifier` Field type: `string`	Field type: `string`
`SerialNumber` Full Usage: `SerialNumber` Field type: `int`	Field type: `int`
`TemperatureFactor` Full Usage: `TemperatureFactor` Field type: `float`	Field type: `float`
`X` Full Usage: `X` Field type: `float`	Field type: `float`
`Y` Full Usage: `Y` Field type: `float`	Field type: `float`
`Z` Full Usage: `Z` Field type: `float`	Field type: `float`

Static members

Static member Description

Static member	Description
`HetAtom.create (serialNumber, name, alternateLocationIndicator, residueName, chainIdentifier, residueSequenceNumber, residueInsertionCode, x, y, z, occupancy, temperatureFactor, segmentIdentifier, elementSymbol, charge)` Full Usage: `HetAtom.create (serialNumber, name, alternateLocationIndicator, residueName, chainIdentifier, residueSequenceNumber, residueInsertionCode, x, y, z, occupancy, temperatureFactor, segmentIdentifier, elementSymbol, charge)` Parameters: serialNumber : `int` name : `AtomName` alternateLocationIndicator : `string` residueName : `string` chainIdentifier : `string` residueSequenceNumber : `int` residueInsertionCode : `string` x : `float` y : `float` z : `float` occupancy : `float` temperatureFactor : `float` segmentIdentifier : `string` elementSymbol : `string` charge : `string` Returns: `HetAtom`	serialNumber : `int` name : `AtomName` alternateLocationIndicator : `string` residueName : `string` chainIdentifier : `string` residueSequenceNumber : `int` residueInsertionCode : `string` x : `float` y : `float` z : `float` occupancy : `float` temperatureFactor : `float` segmentIdentifier : `string` elementSymbol : `string` charge : `string` Returns: `HetAtom`
`HetAtom.toString atom` Full Usage: `HetAtom.toString atom` Parameters: atom : `HetAtom` Returns: `string`	atom : `HetAtom` Returns: `string`


                
                  
                    
                      HetAtom.create (serialNumber, name, alternateLocationIndicator, residueName, chainIdentifier, residueSequenceNumber, residueInsertionCode, x, y, z, occupancy, temperatureFactor, segmentIdentifier, elementSymbol, charge)

Full Usage:

HetAtom.create (serialNumber, name, alternateLocationIndicator, residueName, chainIdentifier, residueSequenceNumber, residueInsertionCode, x, y, z, occupancy, temperatureFactor, segmentIdentifier, elementSymbol, charge)

Parameters:

serialNumber : int

name : AtomName

alternateLocationIndicator : string

residueName : string

chainIdentifier : string

residueSequenceNumber : int

residueInsertionCode : string

x : float

y : float

z : float

occupancy : float

temperatureFactor : float

segmentIdentifier : string

elementSymbol : string

charge : string

Returns: HetAtom

serialNumber : int
name : AtomName
alternateLocationIndicator : string
residueName : string
chainIdentifier : string
residueSequenceNumber : int
residueInsertionCode : string
x : float
y : float
z : float
occupancy : float
temperatureFactor : float
segmentIdentifier : string
elementSymbol : string
charge : string

Returns: HetAtom


                
                  
                    
                      HetAtom.toString atom

Full Usage: HetAtom.toString atom

Parameters:

atom : HetAtom

Returns: string

atom : HetAtom

Returns: string