AccelerationHeuristicsOptions (BioFSharp) | BioFSharp

AccelerationHeuristicsOptions Type

Namespace: BioFSharp.BioContainers
Assembly: BioFSharp.BioContainers.dll
Parent Module: HMMER
Base Type: obj
All Interfaces: IEquatable<AccelerationHeuristicsOptions> , IStructuralEquatable , IComparable<AccelerationHeuristicsOptions> , IComparable , IStructuralComparable

Options controlling acceleration heuristics:

Union cases

Union case	Description
`FwdThreshold float` Full Usage: `FwdThreshold float` Parameters: Item : `float`	Stage 3 (Fwd) threshold: promote hits w/ P <= F3 Item : `float`
`MSVThreshold float` Full Usage: `MSVThreshold float` Parameters: Item : `float`	Stage 1 (MSV) threshold: promote hits w/ P <= F1 Item : `float`
`NoBiasFilter` Full Usage: `NoBiasFilter`	turn off composition bias filter
`NoFilters` Full Usage: `NoFilters`	Turn all heuristic filters off (less speed, more power)
`VitThreshold float` Full Usage: `VitThreshold float` Parameters: Item : `float`	Stage 2 (Vit) threshold: promote hits w/ P <= F2 Item : `float`

Static members

Static member	Description
`AccelerationHeuristicsOptions.make` Full Usage: `AccelerationHeuristicsOptions.make` Returns: `AccelerationHeuristicsOptions -> string list`	Returns: `AccelerationHeuristicsOptions -> string list`