SingleSequenceHandlingOptions (BioFSharp)

SingleSequenceHandlingOptions Type

Namespace: BioFSharp.BioContainers
Assembly: BioFSharp.BioContainers.dll
Parent Module: HMMbuild
Base Type: obj
All Interfaces: IEquatable<SingleSequenceHandlingOptions> , IStructuralEquatable , IComparable<SingleSequenceHandlingOptions> , IComparable , IStructuralComparable

Handling single sequence inputs:

Union case	Description
`SMatrix SubstitutionScoreMatrix` Full Usage: `SMatrix SubstitutionScoreMatrix` Parameters: Item : `SubstitutionScoreMatrix`	substitution score matrix (built-in matrices, use with UseSubstitutionMatrix) Item : `SubstitutionScoreMatrix`
`SMatrixFile string` Full Usage: `SMatrixFile string` Parameters: Item : `string`	read substitution score matrix from file (use with UseSubstitutionMatrix) Item : `string`
`UseSubstitutionMatrix` Full Usage: `UseSubstitutionMatrix`	use substitution score matrix for single-sequence inputs

Static member Description

Static member	Description
`SingleSequenceHandlingOptions.make` Full Usage: `SingleSequenceHandlingOptions.make` Returns: `SingleSequenceHandlingOptions -> string list`	Returns: `SingleSequenceHandlingOptions -> string list`
`SingleSequenceHandlingOptions.makeWith m` Full Usage: `SingleSequenceHandlingOptions.makeWith m` Parameters: m : `MountInfo` Returns: `SingleSequenceHandlingOptions -> string list`	m : `MountInfo` Returns: `SingleSequenceHandlingOptions -> string list`


                
                  
                    
                      SingleSequenceHandlingOptions.make

Full Usage: SingleSequenceHandlingOptions.make

Returns: SingleSequenceHandlingOptions -> string list


                
                  
                    
                      SingleSequenceHandlingOptions.makeWith m

Full Usage: SingleSequenceHandlingOptions.makeWith m

Parameters:

m : MountInfo

Returns: SingleSequenceHandlingOptions -> string list