AlignmentEndsProtrusionOptions (BioFSharp) | BioFSharp

AlignmentEndsProtrusionOptions Type

Namespace: BioFSharp.BioContainers
Assembly: BioFSharp.BioContainers.dll
Parent Module: STAR
Base Type: obj
All Interfaces: IEquatable<AlignmentEndsProtrusionOptions> , IStructuralEquatable , IComparable<AlignmentEndsProtrusionOptions> , IComparable , IStructuralComparable

maximum and type of allowed allow protrusion of alignment ends, i.e. start (end) of the +strand mate downstream of the start (end) of the -strand mate

Union cases

Union case	Description
`ConcordantPair int` Full Usage: `ConcordantPair int` Parameters: Item : `int`	report aligments with non-zero protrusion as concordant pairs Item : `int`
`DiscordantPair int` Full Usage: `DiscordantPair int` Parameters: Item : `int`	report alignments with non-zero protrusion as discordant pairs Item : `int`

Static members

Static member	Description
`AlignmentEndsProtrusionOptions.make` Full Usage: `AlignmentEndsProtrusionOptions.make` Returns: `AlignmentEndsProtrusionOptions -> string`	Returns: `AlignmentEndsProtrusionOptions -> string`