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AlignmentOrder Type

Union cases

Union case Description

Old24

Full Usage: Old24

quasi-random order used before 2.5.0

Random

Full Usage: Random

random order of alignments for each multi-mapper. Read mates (pairs) are always adjacent, all alignment for each read stay together. This option will become default in the future releases.

Static members

Static member Description

AlignmentOrder.make

Full Usage: AlignmentOrder.make

Returns: AlignmentOrder -> string
Returns: AlignmentOrder -> string

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