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GenomeLoad Type

mode of shared memory usage for the genome files. Only used with --runMode alignReads.

Union cases

Union case Description

LoadAndExit

Full Usage: LoadAndExit

load genome into shared memory and exit, keeping the genome in memory for future runs

LoadAndKeep

Full Usage: LoadAndKeep

load genome into shared and keep it in memory after run

LoadAndRemove

Full Usage: LoadAndRemove

NoSharedMemory

Full Usage: NoSharedMemory

do not use shared memory, each job will have its own private copy of the genome

Remove

Full Usage: Remove

do not map anything, just remove loaded genome from memory

Static members

Static member Description

GenomeLoad.make

Full Usage: GenomeLoad.make

Returns: GenomeLoad -> string
Returns: GenomeLoad -> string

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