OutputFilterOptions (BioFSharp) | BioFSharp

OutputFilterOptions Type

Namespace: BioFSharp.BioContainers
Assembly: BioFSharp.BioContainers.dll
Parent Module: STAR
Base Type: obj
All Interfaces: IEquatable<OutputFilterOptions> , IStructuralEquatable , IComparable<OutputFilterOptions> , IComparable , IStructuralComparable

filter the output into main SAM/BAM files

Union cases

Union case	Description
`KeepAllAddedReferences` Full Usage: `KeepAllAddedReferences`	keep all alignments to the extra reference sequences added with --genomeFastaFiles at the mapping stage.
`KeepOnlyAddedReferences` Full Usage: `KeepOnlyAddedReferences`	only keep the reads for which all alignments are to the extra reference sequences added with --genomeFastaFiles at the mapping stage.

Static members

Static member	Description
`OutputFilterOptions.make` Full Usage: `OutputFilterOptions.make` Returns: `OutputFilterOptions -> string`	Returns: `OutputFilterOptions -> string`