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ReadFilesType Type

format of input read files

Union cases

Union case Description

FastX

Full Usage: FastX

FASTA or FASTQ

SAMPairedEnd

Full Usage: SAMPairedEnd

SAM or BAM paired-end reads; for BAM use --readFilesCommand samtools view

SAMSingleEnd

Full Usage: SAMSingleEnd

SAM or BAM single-end reads; for BAM use --readFilesCommand samtools view

Static members

Static member Description

ReadFilesType.make

Full Usage: ReadFilesType.make

Returns: ReadFilesType -> string
Returns: ReadFilesType -> string

Type something to start searching.