RunMode (BioFSharp) | BioFSharp

RunMode Type

Namespace: BioFSharp.BioContainers
Assembly: BioFSharp.BioContainers.dll
Parent Module: STAR
Base Type: obj
All Interfaces: IEquatable<RunMode> , IStructuralEquatable , IComparable<RunMode> , IComparable , IStructuralComparable

type of the STAR run

Union cases

Union case	Description
`AlignReads` Full Usage: `AlignReads`	map reads
`GenomeGenerate` Full Usage: `GenomeGenerate`	generate genome files
`InputAlignmentsFromBAM` Full Usage: `InputAlignmentsFromBAM`	input alignments from BAM. Presently only works with --outWigType and --bamRemoveDuplicates.
`LiftOver` Full Usage: `LiftOver`	lift-over of GTF files (--sjdbGTFfile) between genome assemblies using chain file(s) from --genomeChainFiles.

Static members

Static member	Description
`RunMode.make` Full Usage: `RunMode.make` Returns: `RunMode -> string`	Returns: `RunMode -> string`