UnmappedReadOptions (BioFSharp) | BioFSharp

UnmappedReadOptions Type

Namespace: BioFSharp.BioContainers
Assembly: BioFSharp.BioContainers.dll
Parent Module: STAR
Base Type: obj
All Interfaces: IEquatable<UnmappedReadOptions> , IStructuralEquatable , IComparable<UnmappedReadOptions> , IComparable , IStructuralComparable

output of unmapped reads in the SAM format

Union cases

Union case	Description
`Discard` Full Usage: `Discard`	no output
`Within` Full Usage: `Within`	output unmapped reads within the main SAM file (i.e. Aligned.out.sam)
`WithinKeepPairs` Full Usage: `WithinKeepPairs`	record unmapped mate for each alignment, and, in case of unsorted output, keep it adjacent to its mapped mate. Only affects multi-mapping reads.

Static members

Static member	Description
`UnmappedReadOptions.make` Full Usage: `UnmappedReadOptions.make` Returns: `UnmappedReadOptions -> string`	Returns: `UnmappedReadOptions -> string`