Header menu logo BioFSharp

GFFEntry Type

represents fields of one GFF3 entry line

Record fields

Record Field Description

Attributes

Full Usage: Attributes

Field type: Map<string, string list>

a semicolon-separated list of tag-value pairs, providing additional information about each feature

Field type: Map<string, string list>

EndPos

Full Usage: EndPos

Field type: int

positive 1-based integer end coordinate, relative to the landmark given in column 1

Field type: int

Feature

Full Usage: Feature

Field type: string

feature, type or method; has to be a term from SO or SO accession number

Field type: string

Phase

Full Usage: Phase

Field type: int

for CDS features: indicates where the feature begins with reference to the reading frame

Field type: int

Score

Full Usage: Score

Field type: float

the score of the feature; semantics are ill-defined

Field type: float

Seqid

Full Usage: Seqid

Field type: string

name of sequence where the feature is located

Field type: string

Source

Full Usage: Source

Field type: string

program, organization or database where the sequence is derived from

Field type: string

StartPos

Full Usage: StartPos

Field type: int

positive 1-based integer start coordinate, relative to the landmark given in column 1

Field type: int

Strand

Full Usage: Strand

Field type: char

the strand of the feature

Field type: char

Supplement

Full Usage: Supplement

Field type: string[]

additional supplement information about the feature (optional)

Field type: string[]

Type something to start searching.