FastpParams (BioFSharp)

FastpParams Type

Namespace: BioFSharp.BioContainers
Assembly: BioFSharp.BioContainers.dll
Parent Module: FastP
Base Type: obj
All Interfaces: IEquatable<FastpParams> , IStructuralEquatable , IComparable<FastpParams> , IComparable , IStructuralComparable

Union cases

Union case	Description
`AdapterTrimming AdapterTrimmingOptions list` Full Usage: `AdapterTrimming AdapterTrimmingOptions list` Parameters: Item : `AdapterTrimmingOptions list`	Item : `AdapterTrimmingOptions list`
`BaseCorrection BaseCorrectionOptions list` Full Usage: `BaseCorrection BaseCorrectionOptions list` Parameters: Item : `BaseCorrectionOptions list`	Item : `BaseCorrectionOptions list`
`GlobalTrimming GlobalTrimmingOptions list` Full Usage: `GlobalTrimming GlobalTrimmingOptions list` Parameters: Item : `GlobalTrimmingOptions list`	Item : `GlobalTrimmingOptions list`
`IO IOOptions list` Full Usage: `IO IOOptions list` Parameters: Item : `IOOptions list`	Item : `IOOptions list`
`IndexFiltering IndexFilteringOptions list` Full Usage: `IndexFiltering IndexFilteringOptions list` Parameters: Item : `IndexFilteringOptions list`	Item : `IndexFilteringOptions list`
`LengthFiltering LengthFilteringOptions list` Full Usage: `LengthFiltering LengthFilteringOptions list` Parameters: Item : `LengthFilteringOptions list`	Item : `LengthFilteringOptions list`
`LowComplexityFiltering LowComplexityFilteringOptions list` Full Usage: `LowComplexityFiltering LowComplexityFilteringOptions list` Parameters: Item : `LowComplexityFilteringOptions list`	Item : `LowComplexityFilteringOptions list`
`NumThreads int` Full Usage: `NumThreads int` Parameters: Item : `int`	worker thread number, default is 2 Item : `int`
`OutputSplitting OutputSplittingOptions list` Full Usage: `OutputSplitting OutputSplittingOptions list` Parameters: Item : `OutputSplittingOptions list`	Item : `OutputSplittingOptions list`
`OverrepresentationAnalysis OverrepresentationAnalysisOptions list` Full Usage: `OverrepresentationAnalysis OverrepresentationAnalysisOptions list` Parameters: Item : `OverrepresentationAnalysisOptions list`	Item : `OverrepresentationAnalysisOptions list`
`PolyXTrimming PolyXTrimmingOptions list` Full Usage: `PolyXTrimming PolyXTrimmingOptions list` Parameters: Item : `PolyXTrimmingOptions list`	Item : `PolyXTrimmingOptions list`
`QualityCutting QualityCuttingOptions list` Full Usage: `QualityCutting QualityCuttingOptions list` Parameters: Item : `QualityCuttingOptions list`	Item : `QualityCuttingOptions list`
`QualityFiltering QualityFilteringOptions list` Full Usage: `QualityFiltering QualityFilteringOptions list` Parameters: Item : `QualityFilteringOptions list`	Item : `QualityFilteringOptions list`
`Reporting ReportingOptions list` Full Usage: `Reporting ReportingOptions list` Parameters: Item : `ReportingOptions list`	Item : `ReportingOptions list`
`UMIProcessing UMIProcessingOptions list` Full Usage: `UMIProcessing UMIProcessingOptions list` Parameters: Item : `UMIProcessingOptions list`	Item : `UMIProcessingOptions list`

Static members

Static member Description

Static member	Description
`FastpParams.makeCmd` Full Usage: `FastpParams.makeCmd` Returns: `FastpParams -> string list`	Returns: `FastpParams -> string list`
`FastpParams.makeCmdWith m` Full Usage: `FastpParams.makeCmdWith m` Parameters: m : `MountInfo` Returns: `FastpParams -> string list`	m : `MountInfo` Returns: `FastpParams -> string list`


                
                  
                    
                      FastpParams.makeCmd

Full Usage: FastpParams.makeCmd

Returns: FastpParams -> string list

Returns: FastpParams -> string list


                
                  
                    
                      FastpParams.makeCmdWith m

Full Usage: FastpParams.makeCmdWith m

Parameters:

m : MountInfo

Returns: FastpParams -> string list

m : MountInfo

Returns: FastpParams -> string list